The Role of Seed Endophytes in the Drought Tolerance of the Xerophytic Invasive Plant Lactuca serriola
- Abstract
- In nature, plants form holobionts with a wide array of microbes, among which seed endophytes transmitted vertically to offspring emerge as crucial partners, particularly for invasive plants colonizing new habitats. These seed endophytes exhibit diverse plant growth-promoting traits that aid in plant establishment and growth across various environments, including drought conditions. Notably, drought-tolerant bacteria capable of producing specific material exopolysaccharides play a pivotal role in enhancing the soil water preservation and promoting plant growth under drought stress. However, the effectiveness of these plant growth-promoting bacteria often varies depending on the host species or genotype. Given its xerophytic nature and propensity for wind dispersal in arid seasons, the invasive alien plant Lactuca serriola would be thought to benefit from drought-tolerant seed endophytes, potentially bolstering its resilience to drought stress. Therefore, investigating the interaction between drought-tolerant seed endophytes and L. serriola promises to yield valuable insights into the role of seed endophytes in the invasiveness and adaptive mechanisms of invasive plants. This study aims to identify and characterize drought stress-alleviating seed endophytes from wild L. serriola and elucidate the underlying mechanisms. To achieve this goal, seed endophytes were isolated and identified, and drought-tolerant EPS-producing bacteria were selected using in vitro assays. Subsequently, the stress-alleviating effects of selected isolates were examined across various plant species, including Arabidopsis thaliana, Lactuca serriola, Lactuca sativa, Zea mays, and Camelina sativa. Furthermore, the study investigated genotype-specific responses by assessing five different L. serriola. The potential causes of host-specificity were explored, focusing on plant root exudate components. Finally, the stress-alleviating mechanisms of isolates was elucidated through transcriptome analysis. The results of this study revealed that out of 128 bacterial seed endophytes isolated from wild L. serriola, 42 representative strains exhibited at least one plant growth-promoting trait and drought tolerance. Among these, 12 isolates were selected for in planta assays based on their performance under drought conditions. Notably, Kosakonia cowanii GG1 demonstrated significant improvements in soil water contents and shoot growth under stress compared to uninfected control plants, suggesting the potential of seed endophytes as a novel strategy for invasive plants to thrive in challenging environments. Moreover, the study found that the infection of seed endophytes yielded different outcomes in various plant species. While several isolates positively impacted the plant and soil characteristics of L. serriola under drought, the effects varied depending on the L. serriola genotype. Pearson’s correlation coefficients indicated that rhiozosheath formation played the crucial role in the stress-alleviating effect of isolates. However, the isolates positively affected A. thaliana or L. serriola did not exhibit any stress-alleviating effect on three model plants. Analysis of organic acids within the root exudate revealed qualitative differences among plant species, suggesting their involvement in host-specific interactions. Additionally, K. cowanii GG1 and Erwinia tasmaniensis YJ6, which were effective in L. serriola P2 demonstrated differential responses to organic acid components. These results imply the importance of host species in plant-bacteria interaction and suggest that the root exudate would be a possible factor involved in host-specificity. Finally, the study unveiled that E. tasmaniensis YJ6 primed the L. serriola P2 for drought resistance under benign water conditions. The infected plants exhibited induced signal pathway of the stress-related hormone abscisic acid and accumulated osmoprotectants before the onset of stress, suggesting the potential of E. tasmaniensis YJ6 for biological priming against drought stress. In conclusion, this thesis underscores the pivotal role of seed endophytes in the adaptive mechanisms of L. serriola against drought stress. It highlights the significance of host-specific interactions and biological priming mechanisms in understanding plant-bacteria interactions in the context of environmental stress.
- Author(s)
- 정서린
- Issued Date
- 2025
- Type
- Thesis
- URI
- https://scholar.gist.ac.kr/handle/local/19831
- Alternative Author(s)
- Jeong Seorin
- Department
- 대학원 환경에너지공학부
- Advisor
- Kim, Eunsuk
- Table Of Contents
- ABSTRACT i
CONTENTS iii
LIST OF TABLES vi
LIST OF FIGURES vii
Chapter 1. INTRODUCTION 1
1.1 Plant growth-promoting bacteria 2
1.2 Invasive plant and plant growth-promoting seed endophytic bacteria 6
1.3 Drought stress-ameliorating effect of plant-associated bacteria 8
1.4 Host specificity of plant growth-promoting bacteria 11
1.5 Study species: Lactuca serriola L 12
1.6 Objectives of the dissertation 14
References 17
Chapter 2. Isolation and identification of stress-ameliorating endophytic bacteria from the seeds of L. serriola 24
2.1 Introduction 25
2.2 Materials and Methods 28
2.2.1 Seed collection 28
2.2.2 Isolation and identification of L. serriola seed endophytes 28
2.2.3 Plant growth-promoting trait assay 30
2.2.4 Drought tolerance assay 30
2.2.5 Exopolysaccharide quantification 31
2.2.6 Effects of isolates on A. thaliana under drought 32
2.3 Results 34
2.3.1 Identification of L. serriola seed endophytes 34
2.3.2 Plant growth-promoting trait assay 36
2.3.3 Drought tolerance assay and exopolysaccharide quantification 36
2.3.4 Effects of isolates on A. thaliana under drought 41
2.4 Discussion 44
2.4.1 Seed endophytic bacteria from L. serriola wild population 44
2.4.2 Plant growth-promoting traits and drought-tolerance of isolated endophytes 46
2.4.3 Drought stress-ameliorating effects of endophytes on A. thaliana 46
2.4.4 Conclusions 47
References 48
Chapter 3. Confirmation of host specificity and preference of seed endophytic bacteria against various plant species 54
3.1 Introduction 55
3.2 Materials and Methods 58
3.2.1 GFP transformation of bacterial strain 58
3.2.2 Effects of bacterial infection to L. serriola under drought conditions 59
3.2.3 Visualization of GFP-transformed bacteria under a microscope 62
3.2.4 Effects of bacterial infection on model plants under drought conditions 63
3.2.5 Analysis of root exudate profile with HPLC-MS 64
3.2.6 Chemotaxis assay to root exudate components 66
3.3 Results 67
3.3.1 Effects of bacterial infection to L. serriola under drought condition 67
3.3.2 Visualization of GFP-transformed bacteria 75
3.3.3 Effects of bacterial infection on model plants under drought conditions 78
3.3.4 Analysis of root exudate profile 82
3.3.5 Chemotaxis assay to root exudate components 84
3.4 Discussion 87
3.4.1 Genotype-specific effects of drought-tolerant endophytes on L. serriola 87
3.4.2 Effects of drought-tolerant endophytes on model plant species 88
3.4.3 Chemotatic responses of drought stress-ameliorating endophytes against organic acids 89
3.4.4 Conclusions 90
References 91
Chapter 4. Investigation of drought stress-ameliorating mechanisms of E. tasmaniensis YJ6 through transcriptome analysis 95
4.1 Introduction 96
4.2 Materials and Methods 99
4.2.1 Sample collection and RNA extraction 99
4.2.2 Library construction and sequencing 100
4.2.3 Data-preprocessing, read mapping and assembly 101
4.2.4 Differential gene expression and pathway enrichment analysis 104
4.3 Results 106
4.3.1 Effects of E. tasmaniensis YJ6 treatments to L. serriola under drought condition 106
4.3.2 Gene expression profiles of L. serriola 108
4.3.3 Functional enrichment analysis based on the Kyoto Encyclopedia of Genes and Genomics pathway 118
4.3.4 Functional enrichment analysis based on the Gene Ontology term 133
4.3.5 Functional enrichment analysis based on the Gene Ontology term related to over-represented KEGG pathway 139
4.4 Discussion 144
4.4.1 Drought-induced gene expression changes in L. serriola 144
4.4.2 E. tasmaniensis YJ6-induced gene expression changes in L. serriola 145
4.4.3 Priming effect of E. tasmaniensis YJ6 on L. serriola through ABA signal transduction 149
4.4.4 Limitations of this study and conclusions 151
References 153
Chapter 5. CONCLUSIONS 159
5.1 Isolation and Identification of Stress-ameliorating Endophytic Bacteria from the Seeds of L. serriola 160
5.2 Confirmation of Host Specificity and Preference of Seed Endophytic Bacteria anainst Various Plant Species 160
5.3 Investigation of Drought Stress-ameliorating Mechanisms of E. tasmaniensis YJ6 through Transcriptome Analysis 161
5.4 Limitations 162
5.5 Conclusions 164
References 167
ACKNOWLEDGEMENTS 168
- Degree
- Doctor
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